Homer Software and Data Download

Finding Enriched Peaks, Regions, and Transcripts HOMER contains a program called findPeaks that performs all of the peak calling and transcript identifiion analysis. (Not to be confused with another peak finding program called FindPeaks, which was also very creatively named).Finding peaks is one of the central goals of any ChIPSeq experiment, and the same basic principles apply to other

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DNA specificities modulate the binding of human

DNA specificities modulate the binding of human transcription factor A to mitochondrial DNA control region (bromine dataset, collected at λ = 0.919183 after an absorption nearedge scan XANES that confirmed the presence of but no anomalous peak was detected even though XANES had confirmed the presence of Br in the crystal (see above

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Forward And Reverse Strand Conventions Latest Posts

Visually (I''m not talking about the transcription machinery yet), you would typically read the sequence of a strand in the 53 direction. For the forward strand, this means reading lefttoright, and for the reverse strand it means righttoleft. A gene can live on a DNA strand in one of two orientations.

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PCANCable J1939: PEAKSystem

The PCANCable J1939 routes the CAN lines of those connections to a DSub socket, thus allowing access to PEAK CAN interfaces. Technical Specifiions 9pin DSub socket (in accordance with CiA ® 3031) to 9pole DEUTSCH connector of the HD series (J1939 Type 1)

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Digitization Workflows: Scanning, OCR, and Audio

Digitization Workflows: Scanning, OCR, and Audio Transcription. Posted by Camille Villa on April 13th, 2015. Converting documents, text, images, and sound files to digital and/or machinereadable formats is a prerequisite for many digital humanities projects. Digitization is the process of capturing analog materials as digital images.

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Integrated Machinery Protection and Prediction with

Step 2, Select: After the automatic scan in step 1, the machinery health values are presented for selection. You can accept the defaults or simply check a box to select values as viewable for the operator. Choose from overall vibration peak and phase relay states, and indie which monitoring modules and sensors should be imported. During this

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Molecular Mechanisms for DNA Damage Processing by

Molecular Mechanisms for DNA Damage Processing by Transcription Machinery Wang, Dong University of California San Diego, La Jolla, CA, United States since it constantly scans the transcribed genome during transcription. Biochemical and genetic studies indie that the actions of Pol II when encountering DNA damage vary dramatically for

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Measuring Your Peak Flow Rate American Lung Association

A peak flow meter is a portable, inexpensive, handheld device used to measure how air flows from your lungs in one "fast blast." In other words, the meter measures your ability to push air out of your lungs. Peak flow meters come in two ranges to measure the air pushed out of your lungs. A low

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Classifiion of Transcription Start Sites in the Human

Classifiion of Transcription Start Sites in the Human Genome Ann He, Zandra Ho, Chloe Siebach 1. Introduction The dramatic advancement in genome sequencing within the last decade has transformed the field of genetics. As our data samples grow exponentially and biological techniques become infeasible, there have been new initiatives to use

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ATX1Generated H3K4me3 Is Required for Efficient

Summarily, we conclude that although the presence of ATX1/AtCOMPASS–like is required for assembly of the basal transcription machinery (transcription initiation) at the promoter, the H3K4me3 mark generated by ATX1/AtCOMPASS–like is not required for transcription initiation, but is an activating mark for transcription elongation.

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(PDF) The transcription machinery underlying flower formation

A key step in transcription is the sequence specific binding of transcription factors to their DNA recognition sites. In plants virtually no information is available about the composition of

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Human Promoters Are Intrinsically Directional ScienceDirect

The basal RNA polymerase II transcription machinery initiates unidirectionally from core promoter sequences enriched at one (unidirectional) or both (divergent/bidirectional) edges of such regions. This model is in contrast to the hypothesis that a large majority of human promoters are

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Peak calling with MACS2 Introduction to ChIPSeq using

Describe the different components of the MACS2 peak calling algorithm A commonly used tool for identifying transcription factor binding sites is named Modelbased Analysis of ChIPseq MACS first scans the whole dataset searching for highly significant enriched regions.

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ChIPsequencing Wikipedia

ChIPsequencing, also known as ChIPseq, is a method used to analyze protein interactions with DNA.ChIPseq combines chromatin immunoprecipitation (ChIP) with massively parallel DNA sequencing to identify the binding sites of DNAassociated proteins. It can be used to map global binding sites precisely for any protein of interest. Previously, ChIPonchip was the most common technique utilized

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transcription+machine – Choose by Options, Prices

Start with Staples® to discover transcription+machine available now. Browse by desired features, transcription+machine on sale, prices and ratings.

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p300CBP coactivator family Wikipedia

The p300CBP coactivator family is composed of two closely related transcriptional coactivating proteins (or coactivators): p300 (also called EP300 or E1A binding protein p300) CBP (also known as CREBbinding protein or CREBBP) Both p300 and CBP interact with numerous transcription factors and act to increase the expression of their target genes.

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Mediator subunit MED31 is required for radial patterning

Jun 12, 2018 · SHORTROOT (SHR) and SCARECROW (SCR) orchestrate a transcriptional program that is essential for ground tissue patterning. The regulation of the transcriptional output of SHR/SCR remains unclear. We show that MED31, a subunit of the plant Mediator coactivator complex, bridges the communiion between SHR/SCR and the RNA polymerase II general transcriptional machinery.

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A transcription factor affinitybased code for mammalian

A transcription factor affinitybased code for mammalian transcription initiation Molly Megraw,1 Fernando Pereira,2 Shane T. Jensen,3 Uwe Ohler,1,5 and Artemis G. Hatzigeorgiou2,4,5 1Institute for Genome Sciences and Policy, Duke University, Durham,

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(PDF) Genomic Organization of Human Transcription

Peakpair tags were aligned to the TSS genebygene, binned in [24, 31 – 33], Pol II then scans downstream, where it ing of Pol III transcription machinery and relationship with TFIIS

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PCANCable J1939: PEAKSystem

The PCANCable J1939 routes the CAN lines of those connections to a DSub socket, thus allowing access to PEAK CAN interfaces. Technical Specifiions 9pin DSub socket (in accordance with CiA ® 3031) to 9pole DEUTSCH connector of the HD series (J1939 Type 1)

Obtener precio

Intron DNA Sequences Can Be More Important Than the

Apr 01, 2017 · The main requirement for sequences to act as the promoter of intronregulated genes such as TRP1 might be a region of open chromatin that allows access of the transcription machinery to the DNA. Within that region of open chromatin, there may be DNA sequences that favor initiation, but others can readily substitute when the preferred sites are

Obtener precio

DNA specificities modulate the binding of human

DNA specificities modulate the binding of human transcription factor A to mitochondrial DNA control region (bromine dataset, collected at λ = 0.919183 after an absorption nearedge scan XANES that confirmed the presence of but no anomalous peak was detected even though XANES had confirmed the presence of Br in the crystal (see above

Obtener precio

Peak calling with MACS2 Introduction to ChIPSeq using

Describe the different components of the MACS2 peak calling algorithm A commonly used tool for identifying transcription factor binding sites is named Modelbased Analysis of ChIPseq MACS first scans the whole dataset searching for highly significant enriched regions.

Obtener precio

Circadian Clock Feedback Cycle Through NAMPTMediated NAD+

The circadian clock is encoded by a transcriptiontranslation feedback loop that synchronizes behavior and metabolism with the lightdark cycle. Here we report that both the ratelimiting enzyme in mammalian nicotinamide adenine dinucleotide (NAD+) biosynthesis, nicotinamide phosphoribosyltransferase (NAMPT), and levels of NAD+ display circadian oscillations that are regulated by the core

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Mediator subunit MED31 is required for radial patterning

Jun 12, 2018 · SHORTROOT (SHR) and SCARECROW (SCR) orchestrate a transcriptional program that is essential for ground tissue patterning. The regulation of the transcriptional output of SHR/SCR remains unclear. We show that MED31, a subunit of the plant Mediator coactivator complex, bridges the communiion between SHR/SCR and the RNA polymerase II general transcriptional machinery.

Obtener precio

Keystone Symposia Conference Gene Regulation: From

Keystone Symposia, a nonprofit organization dedied to connecting the scientific community for the benefit of the world community and accelerating life science discovery, conducts scientific conferences on biomedical and life science topics in relaxing environments that alyze information exchange and networking. Meetings are designed to encourage scientists to discuss the newest ideas

Obtener precio

Histone H3 lysine 4 methylation signature associated with

Nov 27, 2018 · The early life environment can exert a profound effect on longterm health. However, differences in developmental epigenetic patterns in response to environmental challenges are not well understood in humans, where nutrient insufficiency and pathogen exposure in early infancy can impact immune system function and metabolic health into adulthood.

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Medical Dictation Winscribe

Outsourcing transcription in the long term can be much more cost effective than in house transcription and frees up the time of your internal staff for other administrative staff. Outsourcing transcription in peak times for short periods can help relieve backlogs and speed up the pace of patient treatments. Read More About Medical Dictation

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Rethinking transcription factors and gene expression MIT

Dec 07, 2017 · Transcription has several important players that must all be in the right place at the right time: the transcription machinery, transcription factors, promoters, and enhancers. According to the existing model, transcription factors are proteins that bind to enhancer regions of the genome and recruit the transcription machinery to the promoter

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Biochemistry Exam 3 Sapling Flashcards Quizlet

Biochemistry Exam 3 Sapling study guide by wmatthe1 includes 67 questions covering vocabulary, terms and more. Quizlet flashcards, activities and games help you improve your grades.

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DNA specificities modulate the binding of human

DNA specificities modulate the binding of human transcription factor A to mitochondrial DNA control region (bromine dataset, collected at λ = 0.919183 after an absorption nearedge scan XANES that confirmed the presence of but no anomalous peak was detected even though XANES had confirmed the presence of Br in the crystal (see above

Obtener precio

Homer Software and Data Download

Finding Enriched Peaks, Regions, and Transcripts HOMER contains a program called findPeaks that performs all of the peak calling and transcript identifiion analysis. (Not to be confused with another peak finding program called FindPeaks, which was also very creatively named).Finding peaks is one of the central goals of any ChIPSeq experiment, and the same basic principles apply to other

Obtener precio

Gene expression: DNA to protein Biology 1510 Biological

Nov 13, 2012 · In prokaryotic cells, ribosomes begin to translate even while the mRNA is still being transcribed. DNA, RNA polymerase, and ribosomes are all in the same loion. This coupled transcription and translation can occur because prokaryotes have no nucleus. (In eukaryotes, the nucleus separates the transcription machinery from the translation

Obtener precio

PairedEnd Analysis of Transcription Start Sites in

Jul 01, 2014 · Understanding plant gene promoter architecture has long been a challenge due to the lack of relevant largescale data sets and analysis methods. Here, we present a publicly available, largescale transcription start site ([TSS][1]) data set in plants using a highresolution method for analysis of 5′ ends of mRNA transcripts. Our data set is produced using the pairedend analysis of

Obtener precio

Transcription initiation platforms and GTF recruitment at

Jul 17, 2011 · Transcription initiation at promoters requires the stepwise assembly of GTFs (TFIIA, TFIIB, TFIID, TFIIE, TFIIF, TFIIH) and Pol II (ref. 1) and correlates with phosphorylation of the C

Obtener precio

Homer Software and Data Download

Finding Enriched Peaks, Regions, and Transcripts HOMER contains a program called findPeaks that performs all of the peak calling and transcript identifiion analysis. (Not to be confused with another peak finding program called FindPeaks, which was also very creatively named).Finding peaks is one of the central goals of any ChIPSeq experiment, and the same basic principles apply to other

Obtener precio

DNA specificities modulate the binding of human

DNA specificities modulate the binding of human transcription factor A to mitochondrial DNA control region (bromine dataset, collected at λ = 0.919183 after an absorption nearedge scan XANES that confirmed the presence of but no anomalous peak was detected even though XANES had confirmed the presence of Br in the crystal (see above

Obtener precio

Forward And Reverse Strand Conventions Latest Posts

Visually (I''m not talking about the transcription machinery yet), you would typically read the sequence of a strand in the 53 direction. For the forward strand, this means reading lefttoright, and for the reverse strand it means righttoleft. A gene can live on a DNA strand in one of two orientations.

Obtener precio

PCANCable J1939: PEAKSystem

The PCANCable J1939 routes the CAN lines of those connections to a DSub socket, thus allowing access to PEAK CAN interfaces. Technical Specifiions 9pin DSub socket (in accordance with CiA ® 3031) to 9pole DEUTSCH connector of the HD series (J1939 Type 1)

Obtener precio

Digitization Workflows: Scanning, OCR, and Audio

Digitization Workflows: Scanning, OCR, and Audio Transcription. Posted by Camille Villa on April 13th, 2015. Converting documents, text, images, and sound files to digital and/or machinereadable formats is a prerequisite for many digital humanities projects. Digitization is the process of capturing analog materials as digital images.

Obtener precio

Integrated Machinery Protection and Prediction with

Step 2, Select: After the automatic scan in step 1, the machinery health values are presented for selection. You can accept the defaults or simply check a box to select values as viewable for the operator. Choose from overall vibration peak and phase relay states, and indie which monitoring modules and sensors should be imported. During this

Obtener precio

Molecular Mechanisms for DNA Damage Processing by

Molecular Mechanisms for DNA Damage Processing by Transcription Machinery Wang, Dong University of California San Diego, La Jolla, CA, United States since it constantly scans the transcribed genome during transcription. Biochemical and genetic studies indie that the actions of Pol II when encountering DNA damage vary dramatically for

Obtener precio

Measuring Your Peak Flow Rate American Lung Association

A peak flow meter is a portable, inexpensive, handheld device used to measure how air flows from your lungs in one "fast blast." In other words, the meter measures your ability to push air out of your lungs. Peak flow meters come in two ranges to measure the air pushed out of your lungs. A low

Obtener precio

Classifiion of Transcription Start Sites in the Human

Classifiion of Transcription Start Sites in the Human Genome Ann He, Zandra Ho, Chloe Siebach 1. Introduction The dramatic advancement in genome sequencing within the last decade has transformed the field of genetics. As our data samples grow exponentially and biological techniques become infeasible, there have been new initiatives to use

Obtener precio

ATX1Generated H3K4me3 Is Required for Efficient

Summarily, we conclude that although the presence of ATX1/AtCOMPASS–like is required for assembly of the basal transcription machinery (transcription initiation) at the promoter, the H3K4me3 mark generated by ATX1/AtCOMPASS–like is not required for transcription initiation, but is an activating mark for transcription elongation.

Obtener precio

(PDF) The transcription machinery underlying flower formation

A key step in transcription is the sequence specific binding of transcription factors to their DNA recognition sites. In plants virtually no information is available about the composition of

Obtener precio

Human Promoters Are Intrinsically Directional ScienceDirect

The basal RNA polymerase II transcription machinery initiates unidirectionally from core promoter sequences enriched at one (unidirectional) or both (divergent/bidirectional) edges of such regions. This model is in contrast to the hypothesis that a large majority of human promoters are

Obtener precio

Peak calling with MACS2 Introduction to ChIPSeq using

Describe the different components of the MACS2 peak calling algorithm A commonly used tool for identifying transcription factor binding sites is named Modelbased Analysis of ChIPseq MACS first scans the whole dataset searching for highly significant enriched regions.

Obtener precio

ChIPsequencing Wikipedia

ChIPsequencing, also known as ChIPseq, is a method used to analyze protein interactions with DNA IPseq combines chromatin immunoprecipitation (ChIP) with massively parallel DNA sequencing to identify the binding sites of DNAassociated proteins. It can be used to map global binding sites precisely for any protein of interest. Previously, ChIPonchip was the most common technique utilized

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transcription+machine – Choose by Options, Prices

Start with Staples® to discover transcription+machine available now. Browse by desired features, transcription+machine on sale, prices and ratings.

Obtener precio

p300CBP coactivator family Wikipedia

The p300CBP coactivator family is composed of two closely related transcriptional coactivating proteins (or coactivators): p300 (also called EP300 or E1A binding protein p300) CBP (also known as CREBbinding protein or CREBBP) Both p300 and CBP interact with numerous transcription factors and act to increase the expression of their target genes.

Obtener precio

Mediator subunit MED31 is required for radial patterning

Jun 12, 2018 · SHORTROOT (SHR) and SCARECROW (SCR) orchestrate a transcriptional program that is essential for ground tissue patterning. The regulation of the transcriptional output of SHR/SCR remains unclear. We show that MED31, a subunit of the plant Mediator coactivator complex, bridges the communiion between SHR/SCR and the RNA polymerase II general transcriptional machinery.

Obtener precio

A transcription factor affinitybased code for mammalian

A transcription factor affinitybased code for mammalian transcription initiation Molly Megraw,1 Fernando Pereira,2 Shane T. Jensen,3 Uwe Ohler,1,5 and Artemis G. Hatzigeorgiou2,4,5 1Institute for Genome Sciences and Policy, Duke University, Durham,

Obtener precio

(PDF) Genomic Organization of Human Transcription

Peakpair tags were aligned to the TSS genebygene, binned in [24, 31 – 33], Pol II then scans downstream, where it ing of Pol III transcription machinery and relationship with TFIIS

Obtener precio

PCANCable J1939: PEAKSystem

The PCANCable J1939 routes the CAN lines of those connections to a DSub socket, thus allowing access to PEAK CAN interfaces. Technical Specifiions 9pin DSub socket (in accordance with CiA ® 3031) to 9pole DEUTSCH connector of the HD series (J1939 Type 1)

Obtener precio

Intron DNA Sequences Can Be More Important Than the

Apr 01, 2017 · The main requirement for sequences to act as the promoter of intronregulated genes such as TRP1 might be a region of open chromatin that allows access of the transcription machinery to the DNA. Within that region of open chromatin, there may be DNA sequences that favor initiation, but others can readily substitute when the preferred sites are

Obtener precio

DNA specificities modulate the binding of human

DNA specificities modulate the binding of human transcription factor A to mitochondrial DNA control region (bromine dataset, collected at λ = 0.919183 after an absorption nearedge scan XANES that confirmed the presence of but no anomalous peak was detected even though XANES had confirmed the presence of Br in the crystal (see above

Obtener precio

Peak calling with MACS2 Introduction to ChIPSeq using

Describe the different components of the MACS2 peak calling algorithm A commonly used tool for identifying transcription factor binding sites is named Modelbased Analysis of ChIPseq MACS first scans the whole dataset searching for highly significant enriched regions.

Obtener precio

Circadian Clock Feedback Cycle Through NAMPTMediated NAD+

The circadian clock is encoded by a transcriptiontranslation feedback loop that synchronizes behavior and metabolism with the lightdark cycle. Here we report that both the ratelimiting enzyme in mammalian nicotinamide adenine dinucleotide (NAD+) biosynthesis, nicotinamide phosphoribosyltransferase (NAMPT), and levels of NAD+ display circadian oscillations that are regulated by the core

Obtener precio

Mediator subunit MED31 is required for radial patterning

Jun 12, 2018 · SHORTROOT (SHR) and SCARECROW (SCR) orchestrate a transcriptional program that is essential for ground tissue patterning. The regulation of the transcriptional output of SHR/SCR remains unclear. We show that MED31, a subunit of the plant Mediator coactivator complex, bridges the communiion between SHR/SCR and the RNA polymerase II general transcriptional machinery.

Obtener precio

Keystone Symposia Conference Gene Regulation: From

Keystone Symposia, a nonprofit organization dedied to connecting the scientific community for the benefit of the world community and accelerating life science discovery, conducts scientific conferences on biomedical and life science topics in relaxing environments that alyze information exchange and networking. Meetings are designed to encourage scientists to discuss the newest ideas

Obtener precio

Histone H3 lysine 4 methylation signature associated with

Nov 27, 2018 · The early life environment can exert a profound effect on longterm health. However, differences in developmental epigenetic patterns in response to environmental challenges are not well understood in humans, where nutrient insufficiency and pathogen exposure in early infancy can impact immune system function and metabolic health into adulthood.

Obtener precio

Medical Dictation Winscribe

Outsourcing transcription in the long term can be much more cost effective than in house transcription and frees up the time of your internal staff for other administrative staff. Outsourcing transcription in peak times for short periods can help relieve backlogs and speed up the pace of patient treatments. Read More About Medical Dictation

Obtener precio

Rethinking transcription factors and gene expression MIT

Dec 07, 2017 · Transcription has several important players that must all be in the right place at the right time: the transcription machinery, transcription factors, promoters, and enhancers. According to the existing model, transcription factors are proteins that bind to enhancer regions of the genome and recruit the transcription machinery to the promoter

Obtener precio

Biochemistry Exam 3 Sapling Flashcards Quizlet

Biochemistry Exam 3 Sapling study guide by wmatthe1 includes 67 questions covering vocabulary, terms and more. Quizlet flashcards, activities and games help you improve your grades.

Obtener precio

DNA specificities modulate the binding of human

DNA specificities modulate the binding of human transcription factor A to mitochondrial DNA control region (bromine dataset, collected at λ = 0.919183 after an absorption nearedge scan XANES that confirmed the presence of but no anomalous peak was detected even though XANES had confirmed the presence of Br in the crystal (see above

Obtener precio

Homer Software and Data Download

Finding Enriched Peaks, Regions, and Transcripts HOMER contains a program called findPeaks that performs all of the peak calling and transcript identifiion analysis. (Not to be confused with another peak finding program called FindPeaks, which was also very creatively named).Finding peaks is one of the central goals of any ChIPSeq experiment, and the same basic principles apply to other

Obtener precio

Gene expression: DNA to protein Biology 1510 Biological

Nov 13, 2012 · In prokaryotic cells, ribosomes begin to translate even while the mRNA is still being transcribed. DNA, RNA polymerase, and ribosomes are all in the same loion. This coupled transcription and translation can occur because prokaryotes have no nucleus. (In eukaryotes, the nucleus separates the transcription machinery from the translation

Obtener precio

PairedEnd Analysis of Transcription Start Sites in

Jul 01, 2014 · Understanding plant gene promoter architecture has long been a challenge due to the lack of relevant largescale data sets and analysis methods. Here, we present a publicly available, largescale transcription start site ([TSS][1]) data set in plants using a highresolution method for analysis of 5′ ends of mRNA transcripts. Our data set is produced using the pairedend analysis of

Obtener precio

Transcription initiation platforms and GTF recruitment at

Jul 17, 2011 · Transcription initiation at promoters requires the stepwise assembly of GTFs (TFIIA, TFIIB, TFIID, TFIIE, TFIIF, TFIIH) and Pol II (ref. 1) and correlates with phosphorylation of the C

Obtener precio

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